{ "_id": "6a102df7acfb0bcc41c94184", "Package": "rnaCrosslinkOO", "Type": "Package", "Title": "Analysis of RNA Crosslinking Data", "Version": "0.1.4", "Authors@R": "c(person(\"Jonathan\", \"Price\", \nemail=\"jlp76@cam.ac.uk\",\nrole=c(\"aut\",\"cre\"),\ncomment = c(ORCID = \"0000-0001-6554-5667\")),\nperson(\"Andrew\",\n\"Lim\",\nemail=\"ajhl3@cam.ac.uk\",\nrole=c(\"ctb\")))", "Maintainer": "Jonathan Price ", "Description": "Analysis of RNA crosslinking data for RNA structure\nprediction. The package is suitable for the analysis of RNA\nstructure cross-linking data and chemical probing data.", "License": "GPL-3", "Encoding": "UTF-8", "BugReports": "https://github.com/JLP-BioInf/rnaCrosslinkOO/issues", "RoxygenNote": "7.3.1", "Collate": "'rnaCrosslinkOO.R' 'rnaCrosslinkDataSet.R'\n'clusterrnaCrosslink.R'\n'clusterrnaCrosslinkMethodsAndHelpers.R'\n'commonHelpersAndMethods.R' 'commonStatsAndPlots.R'\n'foldrnaCrosslink.R' 'foldrnaCrosslinkMethodsAndHelpers.R'\n'genericMethods.R' 'rnaCrosslinkDataSetMethodsAndHelpers.R'\n'rnaCrosslinkOO-package.R' 'rnaCrosslinkQC.R'", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-22 10:14:59 UTC", "User": "root" }, "Config/pak/sysreqs": "cmake libfontconfig1-dev libfreetype6-dev\nlibfribidi-dev libglpk-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libtiff-dev libuv1-dev libwebp-dev\nlibxml2-dev libssl-dev libx11-dev zlib1g-dev", "Repository": "https://jlp-bioinf.r-universe.dev", "Date/Publication": "2026-05-14 14:37:25 UTC", "RemoteUrl": "https://github.com/jlp-bioinf/rnacrosslinkoo", "RemoteRef": "HEAD", "RemoteSha": "1cfe4b61b494767069802504dd049f8d9093f724", "Author": "Jonathan Price [aut, cre] (ORCID:\n),\nAndrew Lim [ctb]", "MD5sum": "8e5a9cd503ac065a444db738c345ee18", "_user": "jlp-bioinf", "_type": "src", "_file": "rnaCrosslinkOO_0.1.4.tar.gz", "_fileid": "672881e59724ba94ea261dd60c483f94568d9a2cefa7d75e9d3544d89a865130", "_filesize": 1343456, "_sha256": "672881e59724ba94ea261dd60c483f94568d9a2cefa7d75e9d3544d89a865130", "_created": "2026-05-22T10:14:59.000Z", "_published": "2026-05-22T10:20:39.245Z", "_distro": "noble", "_jobs": [ { "job": 77360201993, "time": 248, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "7158200869" }, { "job": 77360201964, "time": 278, "config": "linux-release-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "7158210034" }, { "job": 77360201989, "time": 176, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7158179967" }, { "job": 77360202006, "time": 237, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7158198166" }, { "job": 77359441196, "time": 302, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7158126755" }, { "job": 77360201940, "time": 163, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7158176437" }, { "job": 77360202068, "time": 265, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7158206286" }, { "job": 77360202061, "time": 201, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7158188185" }, { "job": 77360201976, "time": 207, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7158189968" } ], "_buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/jlp-bioinf/rnacrosslinkoo", "_commit": { "id": "1cfe4b61b494767069802504dd049f8d9093f724", "author": "Jon <68468769+JLP-BioInf@users.noreply.github.com>", "committer": "Jon <68468769+JLP-BioInf@users.noreply.github.com>", "message": "add sample chooser\n", "time": 1778769445 }, "_maintainer": { "name": "Jonathan Price", "email": "jlp76@cam.ac.uk", "login": "jlp-bioinf", "description": "Bioinformatician ", "uuid": 68468769, "orcid": "0000-0001-6554-5667" }, "_registered": true, "_dependencies": [ { "package": "seqinr", "role": "Depends" }, { "package": "GenomicRanges", "role": "Depends" }, { "package": "stats", "role": "Depends" }, { "package": "ggplot2", "role": "Imports" }, { "package": "reshape2", "role": "Imports" }, { "package": "MASS", "role": "Imports" }, { "package": "mixtools", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "S4Vectors", "role": "Imports" }, { "package": "patchwork", "role": "Imports" }, { "package": "doParallel", "role": "Imports" }, { "package": "igraph", "role": "Imports" }, { "package": "R4RNA", "role": "Imports" }, { "package": "RColorBrewer", "role": "Imports" }, { "package": "IRanges", "role": "Imports" }, { "package": "foreach", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "heatmap3", "role": "Imports" }, { "package": "TopDom", "role": "Imports" }, { "package": "tidyverse", "role": "Imports" }, { "package": "RRNA", "role": "Imports" }, { "package": "ggrepel", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "parallel", "role": "Imports" }, { "package": "ClassDiscovery", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "jlp-bioinf", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-30", "n": 1 }, { "week": "2026-20", "n": 2 } ], "_tags": [], "_topics": [ "comrades", "psoralen", "rna-crosslinking", "rna-structure", "rna-structure-prediction" ], "_stars": 2, "_contributors": [ { "user": "jlp-bioinf", "count": 115, "uuid": 68468769 }, { "user": "ajhlim", "count": 11, "uuid": 152615153 }, { "user": "miamarlene", "count": 4, "uuid": 152306271 }, { "user": "paltedseanuts", "count": 1, "uuid": 142008262 } ], "_userbio": { "uuid": 68468769, "type": "user", "name": "Jon", "description": "Bioinformatician " }, "_downloads": { "count": 191, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/rnaCrosslinkOO" }, "_devurl": "https://github.com/jlp-bioinf/rnacrosslinkoo", "_searchresults": 3, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/rnaCrosslinkOO.html", "manual.pdf" ], "_homeurl": "https://github.com/jlp-bioinf/rnacrosslinkoo", "_realowner": "jlp-bioinf", "_cranurl": true, "_releases": [ { "version": "0.1.2", "date": "2024-02-29" }, { "version": "0.1.3", "date": "2024-04-29" }, { "version": "0.1.4", "date": "2024-07-10" } ], "_exports": [ "clusterGrangesList", "clusterGrangesList<-", "clusterNumbers", "clusterrnaCrosslink", "clusterTableFolded", "clusterTableList", "clusterTableList<-", "compareKnown", "compareKnownStructures", "featureInfo", "foldrnaCrosslink", "getData", "getInteractions", "getReverseInteractions", "group", "InputFiles", "makeExamplernaCrosslinkDataSet", "matrixList", "matrixList<-", "plotClusterAgreement", "plotClusterAgreementHeat", "plotCombinedMatrix", "plotComparisonArc", "plotEnsemblePCA", "plotInteractions", "plotInteractionsAverage", "plotMatrices", "plotMatricesAverage", "plotStructure", "readNumbers", "rnaCrosslinkDataSet", "rnaCrosslinkQC", "rnas", "rnaSize", "sampleNames", "sampleTable", "topInteracters", "topInteractions", "topTranscripts", "trimClusters" ], "_help": [ { "page": "clusterGrangesList", "title": "clusterGrangesList", "topics": [ "clusterGrangesList", "clusterGrangesList,rnaCrosslinkDataSet-method" ] }, { "page": "clusterGrangesList_set", "title": "clusterGrangesList<-", "topics": [ "clusterGrangesList<-", "clusterGrangesList<-,rnaCrosslinkDataSet-method" ] }, { "page": "clusterNumbers", "title": "clusterNumbers", "topics": [ "clusterNumbers", "clusterNumbers,rnaCrosslinkDataSet-method" ] }, { "page": "clusterrnaCrosslink", "title": "clusterrnaCrosslink", "topics": [ "clusterrnaCrosslink", "clusterrnaCrosslink,rnaCrosslinkDataSet-method" ] }, { "page": "clusterTableFolded", "title": "clusterTableFolded", "topics": [ "clusterTableFolded", "clusterTableFolded,rnaCrosslinkDataSet-method" ] }, { "page": "clusterTableList", "title": "clusterTableList", "topics": [ "clusterTableList", "clusterTableList,rnaCrosslinkDataSet-method" ] }, { "page": "clusterTableList_set", "title": "clusterTableList<-", "topics": [ "clusterTableList<-", "clusterTableList<-,rnaCrosslinkDataSet-method" ] }, { "page": "compareKnown", "title": "compareKnown", "topics": [ "compareKnown", "compareKnown,rnaCrosslinkDataSet-method" ] }, { "page": "compareKnownStructures", "title": "compareKnownStructures", "topics": [ "compareKnownStructures", "compareKnownStructures,rnaCrosslinkDataSet-method" ] }, { "page": "featureInfo", "title": "featureInfo", "topics": [ "featureInfo", "featureInfo,rnaCrosslinkDataSet-method" ] }, { "page": "findBasePairsRNAcoFold2", "title": "findBasePairsRNAcoFold2", "topics": [ "findBasePairsRNAcoFold2" ] }, { "page": "findBasePairsRNAfold", "title": "findBasePairsRNAfold", "topics": [ "findBasePairsRNAfold" ] }, { "page": "findBasePairsRNAfold2", "title": "findBasePairsRNAfold2", "topics": [ "findBasePairsRNAfold2" ] }, { "page": "foldrnaCrosslink", "title": "foldrnaCrosslink", "topics": [ "foldrnaCrosslink", "foldrnaCrosslink,rnaCrosslinkDataSet-method" ] }, { "page": "getAdjacancyMat", "title": "getAdjacancyMat", "topics": [ "getAdjacancyMat" ] }, { "page": "getClusterClusterShortRangeWhole", "title": "getClusterClusterShortRangeWhole", "topics": [ "getClusterClusterShortRangeWhole" ] }, { "page": "getData", "title": "getData", "topics": [ "getData", "getData,rnaCrosslinkDataSet-method" ] }, { "page": "getInteractions", "title": "getInteractions", "topics": [ "getInteractions", "getInteractions,rnaCrosslinkDataSet-method" ] }, { "page": "getMatrices", "title": "getMatrices", "topics": [ "getMatrices" ] }, { "page": "getReverseInteractions", "title": "getReverseInteractions", "topics": [ "getReverseInteractions", "getReverseInteractions,rnaCrosslinkDataSet-method" ] }, { "page": "group", "title": "group", "topics": [ "group", "group,rnaCrosslinkDataSet-method" ] }, { "page": "InputFiles", "title": "InputFiles", "topics": [ "InputFiles", "InputFiles,rnaCrosslinkDataSet-method" ] }, { "page": "InputToGRanges", "title": "InputToGRanges", "topics": [ "InputToGRanges" ] }, { "page": "makeExamplernaCrosslinkDataSet", "title": "makeExamplernaCrosslinkDataSet", "topics": [ "makeExamplernaCrosslinkDataSet" ] }, { "page": "matrixList", "title": "matrixList", "topics": [ "matrixList", "matrixList,rnaCrosslinkDataSet-method" ] }, { "page": "matrixList_set", "title": "matrixList", "topics": [ "matrixList<-", "matrixList<-,rnaCrosslinkDataSet-method" ] }, { "page": "plotClusterAgreement", "title": "Plot a heatmap that plots the agreements between replicates after clusterrnaCrosslink has been performed", "topics": [ "plotClusterAgreement", "plotClusterAgreement,rnaCrosslinkDataSet-method" ] }, { "page": "plotClusterAgreementHeat", "title": "Plot a heatmap that plots the agreements between replicates after clusterrnaCrosslink has been performed", "topics": [ "plotClusterAgreementHeat", "plotClusterAgreementHeat,rnaCrosslinkDataSet-method" ] }, { "page": "plotCombinedMatrix", "title": "Plots a contact map of two chosen samples for chosen stages in the analysis, with each chosen sample on separate halves of the contact map", "topics": [ "plotCombinedMatrix", "plotCombinedMatrix,rnaCrosslinkDataSet-method" ] }, { "page": "plotComparisonArc", "title": "plotComparisonArc", "topics": [ "plotComparisonArc", "plotComparisonArc,rnaCrosslinkDataSet-method" ] }, { "page": "plotEnsemblePCA", "title": "plotEnsemblePCA", "topics": [ "plotEnsemblePCA", "plotEnsemblePCA,rnaCrosslinkDataSet-method" ] }, { "page": "plotInteractions", "title": "Plots a contact map of interactions of each sample of an RNA (interactor) on the RNA of interest", "topics": [ "plotInteractions", "plotInteractions,rnaCrosslinkDataSet-method" ] }, { "page": "plotInteractionsAverage", "title": "Plots a contact map of interactions of all samples of an RNA (interactor) on the RNA of interest", "topics": [ "plotInteractionsAverage", "plotInteractionsAverage,rnaCrosslinkDataSet-method" ] }, { "page": "plotMatrices", "title": "Plots a number of contact maps to file of each sample for a stage in the analysis", "topics": [ "plotMatrices", "plotMatrices,rnaCrosslinkDataSet-method" ] }, { "page": "plotMatricesAverage", "title": "plotMatricesAverage", "topics": [ "plotMatricesAverage", "plotMatricesAverage,rnaCrosslinkDataSet-method" ] }, { "page": "plotStructure", "title": "plotStructure", "topics": [ "plotStructure", "plotStructure,rnaCrosslinkDataSet-method" ] }, { "page": "printClustersFast", "title": "printClustersFast", "topics": [ "printClustersFast" ] }, { "page": "readNumbers", "title": "readNumbers", "topics": [ "readNumbers", "readNumbers,rnaCrosslinkDataSet-method" ] }, { "page": "rnaCrosslinkDataSet", "title": "rnaCrosslinkDataSet", "topics": [ "rnaCrosslinkDataSet", "rnaCrosslinkDataSet-class" ] }, { "page": "rnaCrosslinkQC", "title": "rnaCrosslinkQC", "topics": [ "rnaCrosslinkQC" ] }, { "page": "rnas", "title": "rnas", "topics": [ "rnas", "rnas,rnaCrosslinkDataSet-method" ] }, { "page": "rnaSize", "title": "rnaSize", "topics": [ "rnaSize", "rnaSize,rnaCrosslinkDataSet-method" ] }, { "page": "sampleChimeras", "title": "sampleChimeras", "topics": [ "sampleChimeras" ] }, { "page": "sampleNames", "title": "sampleNames", "topics": [ "sampleNames", "sampleNames,rnaCrosslinkDataSet-method" ] }, { "page": "sampleTable", "title": "sampleTable", "topics": [ "sampleTable", "sampleTable,rnaCrosslinkDataSet-method" ] }, { "page": "subsetInputList2", "title": "subsetInputList2", "topics": [ "subsetInputList2" ] }, { "page": "swapInputs", "title": "swapInputs", "topics": [ "swapInputs" ] }, { "page": "swapInputs2", "title": "swapInputs2", "topics": [ "swapInputs2" ] }, { "page": "swapInputs3", "title": "swapInputs3", "topics": [ "swapInputs3" ] }, { "page": "topInteracters", "title": "topInteracters", "topics": [ "topInteracters", "topInteracters,rnaCrosslinkDataSet-method" ] }, { "page": "topInteractions", "title": "topInteractions", "topics": [ "topInteractions", "topInteractions,rnaCrosslinkDataSet-method" ] }, { "page": "topTranscripts", "title": "topTranscripts", "topics": [ "topTranscripts", "topTranscripts,rnaCrosslinkDataSet-method" ] }, { "page": "trimClusters", "title": "trimClusters", "topics": [ "trimClusters", "trimClusters,rnaCrosslinkDataSet-method" ] } ], "_readme": "https://github.com/jlp-bioinf/rnacrosslinkoo/raw/HEAD/README.md", "_rundeps": [ "ade4", "askpass", "backports", "base64enc", "Biobase", "BiocGenerics", "Biostrings", "bit", "bit64", "blob", "broom", "bslib", "cachem", "callr", "cellranger", "ClassDiscovery", "cli", "clipr", "cluster", "codetools", "conflicted", "cpp11", "crayon", "crosstalk", "curl", "data.table", "DBI", "dbplyr", "digest", "doParallel", "dplyr", "dtplyr", "evaluate", "farver", "fastcluster", "fastmap", "fontawesome", "forcats", "foreach", "fs", "gargle", "generics", "GenomicRanges", "ggplot2", "ggrepel", "glue", "googledrive", "googlesheets4", "gtable", "haven", "heatmap3", "highr", "hms", "htmltools", "htmlwidgets", "httr", "ids", "igraph", "IRanges", "isoband", "iterators", "jquerylib", "jsonlite", "kernlab", "knitr", "labeling", "later", "lattice", "lazyeval", "lifecycle", "lubridate", "magrittr", "MASS", "Matrix", "matrixStats", "mclust", "memoise", "mime", "mixtools", "modelr", "nlme", "oompaBase", "oompaData", "openssl", "otel", "patchwork", "pillar", "pixmap", "pkgconfig", "plotly", "plyr", "prettyunits", "processx", "progress", "promises", "ps", "purrr", "R4RNA", "R6", "ragg", "rappdirs", "RColorBrewer", "Rcpp", "RcppArmadillo", "readr", "readxl", "rematch", "rematch2", "reprex", "reshape2", "rlang", "rmarkdown", "RRNA", "rstudioapi", "rvest", "S4Vectors", "S7", "sass", "scales", "segmented", "selectr", "Seqinfo", "seqinr", "sp", "stringi", "stringr", "survival", "sys", "systemfonts", "textshaping", "tibble", "tidyr", "tidyselect", "tidyverse", "timechange", "tinytex", "TopDom", "tzdb", "utf8", "uuid", "vctrs", "viridisLite", "vroom", "withr", "xfun", "xml2", "XVector", "yaml" ], "_vignettes": [ { "source": "rnaCrosslinkOO.Rmd", "filename": "rnaCrosslinkOO.html", "title": "rnaCrosslinkOO", "author": "Jonathan Price", "engine": "knitr::rmarkdown", "headings": [ "rnaCrosslinkOO", "The COMRADES experiment", "rnaCrosslink data pre-processing", "Nextflow pipeline", "Nextflow pipeline output", "Input for rnaCrosslink-OO", "Load the Library", "Make the Sample table", "Choose RNA", "Transript fasta", "A set of interactions to compare to (optional)", "Reactivities (optional)", "Slow Start", "rnaCrosslinkQC", "Make the Object", "Slots / Attributes", "Analysis stage", "Meta-data", "Raw-data and processed data", "rnaCrosslinkDataSet - make object", "Access the data within the instance", "General Acessors", "Check Status of Instance", "Retreive RNA Size", "Retreive Meta-data", "Retreive Sample Groups", "Retreive Sample Names", "Retreive Data in original format", "Retreive Contact Matrices", "Get Data", "Check Interactions", "topTranscripts", "topInteractors", "topInteractions", "Get Count Matricies", "Clustering", "Cluster Numbers", "Read numbers in clusters", "Cluster Tables", "Cluster GRanges", "Cluster Trimming", "Check Cluster Agreement between replicates", "Folding", "Other Plots and Functionality", "Plotting contact matrices", "Identifying domains", "", "Analyse folds", "Ensemble Stats", "HotSpots of difference", "PCA of ensembl", "Plot to strcutures on an arc diagram", "Plot one structure", "Inter RNA interactions- Plot an interacting partner", "Compare to the \"Known\" structure", "Make a contact matrix of known / comprative interactions", "Compare the Clusters", "Plot the overlapping clusters", "Compare structures with a set of contacts", "Quick start" ], "created": "2024-02-18 21:19:57", "modified": "2024-07-10 16:19:59", "commits": 13 } ], "_score": 4.778151250383644, "_indexed": true, "_nocasepkg": "rnacrosslinkoo", "_universes": [ "jlp-bioinf" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.4", "date": "2026-05-22T10:17:54.000Z", "distro": "noble", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "36322aa395cf7a5ea612bf0f55e18589f047c40480c3245139691356de42dcea", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.6.0", "os": "linux", "version": "0.1.4", "date": "2026-05-22T10:18:12.000Z", "distro": "noble", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "3660bd43ff53958b35acd977f7484f92126f7b0128f8f5fe91dd6c29ec241507", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.5.3", "os": "mac", "version": "0.1.4", "date": "2026-05-22T10:17:20.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "991e59703cefa0624685cb1e243e6d3175e3916e322d37417bb5d1b006c79cc7", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.6.0", "os": "mac", "version": "0.1.4", "date": "2026-05-22T10:17:50.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "a6e8192d8dc6f12085667e9e901d0da4f190d5f9a553e0e47df3a06dbc642535", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.4", "date": "2026-05-22T10:18:19.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "9d1e5318fc6cd99cf9527dd3dde5596d9330ce9b7558ce03ce12b30c9f9159a7", "status": "success", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.7.0", "os": "win", "version": "0.1.4", "date": "2026-05-22T10:16:54.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "318482b4806e4d8a0cd5a8990ac329666fbe107d4764116d1f8448eb0030d9ce", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.5.3", "os": "win", "version": "0.1.4", "date": "2026-05-22T10:16:49.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "7cd9a8cba8fba30923bc1df1dc2ef9a1606a032fadaae910c2c1167ee105717e", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" }, { "r": "4.6.0", "os": "win", "version": "0.1.4", "date": "2026-05-22T10:16:56.000Z", "commit": "1cfe4b61b494767069802504dd049f8d9093f724", "fileid": "1bdf60aac038a9cb64999371c3e1dcbef341ad420d8f4f7a8b6611911b27bcce", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/jlp-bioinf/actions/runs/26281741838" } ] }